J4_8C90_010

3D structure

PDB id

8C90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

CC*GAGUAGG*CUGAAUAUG*CAAG

Length

22 nucleotides

Bulged bases

8C90|1|A|A|404, 8C90|1|A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C90|1|A|C|268
8C90|1|A|C|269
*
8C90|1|A|G|370
8C90|1|A|A|371
8C90|1|A|G|372
8C90|1|A|U|373
8C90|1|A|A|374
8C90|1|A|G|375
8C90|1|A|G|376
*
8C90|1|A|C|398
8C90|1|A|U|399
8C90|1|A|G|400
8C90|1|A|A|401
8C90|1|A|A|402
8C90|1|A|U|403
8C90|1|A|A|404
8C90|1|A|U|405
8C90|1|A|G|406
*
8C90|1|A|C|421
8C90|1|A|A|422
8C90|1|A|A|423
8C90|1|A|G|424

Current chains

Chain A

23S rRNA

Nearby chains