J4_8C98_001

3D structure

PDB id

8C98 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.66 Å

Loop

Sequence

CCAG*CGAUGAGUAG*UGAAUAUG*CAAG

Length

26 nucleotides

Bulged bases

8C98|1|A|U|405

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C98|1|A|C|268
8C98|1|A|C|269
8C98|1|A|A|270
8C98|1|A|G|271
*
8C98|1|A|C|366
8C98|1|A|G|367
8C98|1|A|A|368
8C98|1|A|U|369
8C98|1|A|G|370
8C98|1|A|A|371
8C98|1|A|G|372
8C98|1|A|U|373
8C98|1|A|A|374
8C98|1|A|G|375
*
8C98|1|A|U|399
8C98|1|A|G|400
8C98|1|A|A|401
8C98|1|A|A|402
8C98|1|A|U|403
8C98|1|A|A|404
8C98|1|A|U|405
8C98|1|A|G|406
*
8C98|1|A|C|421
8C98|1|A|A|422
8C98|1|A|A|423
8C98|1|A|G|424

Current chains

Chain A

23S rRNA

Nearby chains