J4_8EV7_012

3D structure

PDB id

8EV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.89 Å

Loop

Sequence

GAG*CAUGUG*CAAAGG*CCGC

Length

19 nucleotides

Bulged bases

8EV7|1|1a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV7|1|1a|G|142
8EV7|1|1a|A|143
8EV7|1|1a|G|144
*
8EV7|1|1a|C|178
8EV7|1|1a|A|179
8EV7|1|1a|U|180
8EV7|1|1a|G|181
8EV7|1|1a|U|182
8EV7|1|1a|G|183
*
8EV7|1|1a|C|194
8EV7|1|1a|A|195
8EV7|1|1a|A|196
8EV7|1|1a|A|197
8EV7|1|1a|G|198
8EV7|1|1a|G|199
*
8EV7|1|1a|C|218
8EV7|1|1a|C|219
8EV7|1|1a|G|220
8EV7|1|1a|C|221

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1t

30S ribosomal protein S20