J4_8FIZ_012

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUGC*GCG*CCUAAGGUAG*CGAAUG

Length

23 nucleotides

Bulged bases

8FIZ|1|BA|U|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|BA|C|1833
8FIZ|1|BA|U|1834
8FIZ|1|BA|G|1835
8FIZ|1|BA|C|1836
*
8FIZ|1|BA|G|1904
8FIZ|1|BA|C|1905
8FIZ|1|BA|G|1906
*
8FIZ|1|BA|C|1924
8FIZ|1|BA|C|1925
8FIZ|1|BA|U|1926
8FIZ|1|BA|A|1927
8FIZ|1|BA|A|1928
8FIZ|1|BA|G|1929
8FIZ|1|BA|G|1930
8FIZ|1|BA|U|1931
8FIZ|1|BA|A|1932
8FIZ|1|BA|G|1933
*
8FIZ|1|BA|C|1967
8FIZ|1|BA|G|1968
8FIZ|1|BA|A|1969
8FIZ|1|BA|A|1970
8FIZ|1|BA|U|1971
8FIZ|1|BA|G|1972

Current chains

Chain BA

23S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BB

Transfer RNA; tRNA

Chain BD

50S ribosomal protein L2