J4_8FIZ_013

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAAGG*CUUGAC*GGU*AGG

Length

18 nucleotides

Bulged bases

8FIZ|1|BA|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|BA|C|2285
8FIZ|1|BA|G|2286
8FIZ|1|BA|A|2287
8FIZ|1|BA|A|2288
8FIZ|1|BA|G|2289
8FIZ|1|BA|G|2290
*
8FIZ|1|BA|C|2342
8FIZ|1|BA|U|2343
8FIZ|1|BA|U|2344
8FIZ|1|BA|G|2345
8FIZ|1|BA|A|2346
8FIZ|1|BA|C|2347
*
8FIZ|1|BA|G|2370
8FIZ|1|BA|G|2371
8FIZ|1|BA|U|2372
*
8FIZ|1|BA|A|2381
8FIZ|1|BA|G|2382
8FIZ|1|BA|G|2383

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BH

50S ribosomal protein L18

Chain BI

50S ribosomal protein L33

Chain BO

50S ribosomal protein L35

Chain DD

50S ribosomal protein L27