J4_8FKP_003

3D structure

PDB id

8FKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GUAAUC*GUUC*GUG*CGCC

Length

17 nucleotides

Bulged bases

8FKP|1|L3|U|4677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKP|1|L3|G|4587
8FKP|1|L3|U|4588
8FKP|1|L3|A|4589
8FKP|1|L3|A|4590
8FKP|1|L3|U|4591
8FKP|1|L3|C|4592
*
8FKP|1|L3|G|4618
8FKP|1|L3|U|4619
8FKP|1|L3|U|4620
8FKP|1|L3|C|4621
*
8FKP|1|L3|G|4676
8FKP|1|L3|U|4677
8FKP|1|L3|G|4678
*
8FKP|1|L3|C|4712
8FKP|1|L3|G|4713
8FKP|1|L3|C|4714
8FKP|1|L3|C|4715

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L3