J4_8FKY_004

3D structure

PDB id

8FKY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State F)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

GG*UUGUGAAG*UUGGAAAG*UC

Length

20 nucleotides

Bulged bases

8FKY|1|L3|G|2693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKY|1|L3|G|2618
8FKY|1|L3|G|2619
*
8FKY|1|L3|U|2636
8FKY|1|L3|U|2637
8FKY|1|L3|G|2638
8FKY|1|L3|U|2639
8FKY|1|L3|G|2640
8FKY|1|L3|A|2641
8FKY|1|L3|A|2642
8FKY|1|L3|G|2643
*
8FKY|1|L3|U|2691
8FKY|1|L3|U|2692
8FKY|1|L3|G|2693
8FKY|1|L3|G|2694
8FKY|1|L3|A|2695
8FKY|1|L3|A|2696
8FKY|1|L3|A|2697
8FKY|1|L3|G|2698
*
8FKY|1|L3|U|2718
8FKY|1|L3|C|2719

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BC

WD repeat-containing protein 55

Chain LD

60S ribosomal protein L19

Chain SS

Ribosome biogenesis protein BOP1