J4_8FKZ_002

3D structure

PDB id

8FKZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

8FKZ|1|L3|A|218, 8FKZ|1|L3|G|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKZ|1|L3|C|196
8FKZ|1|L3|A|197
8FKZ|1|L3|A|198
8FKZ|1|L3|G|199
*
8FKZ|1|L3|C|215
8FKZ|1|L3|C|216
8FKZ|1|L3|C|217
8FKZ|1|L3|A|218
8FKZ|1|L3|G|219
8FKZ|1|L3|C|220
8FKZ|1|L3|C|221
8FKZ|1|L3|C|222
*
8FKZ|1|L3|G|226
8FKZ|1|L3|A|227
8FKZ|1|L3|C|228
*
8FKZ|1|L3|G|240
8FKZ|1|L3|G|241
8FKZ|1|L3|U|242
8FKZ|1|L3|A|243
8FKZ|1|L3|G|244

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L26

Chain SA

60S ribosomal protein L4