J4_8FL4_002

3D structure

PDB id

8FL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

8FL4|1|L3|A|218, 8FL4|1|L3|G|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL4|1|L3|C|196
8FL4|1|L3|A|197
8FL4|1|L3|A|198
8FL4|1|L3|G|199
*
8FL4|1|L3|C|215
8FL4|1|L3|C|216
8FL4|1|L3|C|217
8FL4|1|L3|A|218
8FL4|1|L3|G|219
8FL4|1|L3|C|220
8FL4|1|L3|C|221
8FL4|1|L3|C|222
*
8FL4|1|L3|G|226
8FL4|1|L3|A|227
8FL4|1|L3|C|228
*
8FL4|1|L3|G|240
8FL4|1|L3|G|241
8FL4|1|L3|U|242
8FL4|1|L3|A|243
8FL4|1|L3|G|244

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L26

Chain SA

60S ribosomal protein L4