J4_8FLB_003

3D structure

PDB id

8FLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

8FLB|1|L3|G|1271, 8FLB|1|L3|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLB|1|L3|C|981
8FLB|1|L3|U|982
8FLB|1|L3|C|983
*
8FLB|1|L3|G|1070
8FLB|1|L3|C|1071
8FLB|1|L3|C|1072
*
8FLB|1|L3|G|1240
8FLB|1|L3|C|1241
8FLB|1|L3|G|1242
8FLB|1|L3|C|1243
*
8FLB|1|L3|G|1268
8FLB|1|L3|G|1269
8FLB|1|L3|A|1270
8FLB|1|L3|G|1271
8FLB|1|L3|C|1272
8FLB|1|L3|G|1273

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L29

Chain SC

60S ribosomal protein L6

Chain SD

60S ribosomal protein L7