J4_8FLD_002

3D structure

PDB id

8FLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLD|1|L3|C|196
8FLD|1|L3|A|197
8FLD|1|L3|A|198
8FLD|1|L3|G|199
*
8FLD|1|L3|C|215
8FLD|1|L3|C|216
8FLD|1|L3|C|217
8FLD|1|L3|A|218
8FLD|1|L3|G|219
8FLD|1|L3|C|220
8FLD|1|L3|C|221
8FLD|1|L3|C|222
*
8FLD|1|L3|G|226
8FLD|1|L3|A|227
8FLD|1|L3|C|228
*
8FLD|1|L3|G|240
8FLD|1|L3|G|241
8FLD|1|L3|U|242
8FLD|1|L3|A|243
8FLD|1|L3|G|244

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L26

Chain SA

60S ribosomal protein L4