J4_8FR8_006

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FR8|1|A|G|1664
8FR8|1|A|U|1665
8FR8|1|A|A|1666
8FR8|1|A|C|1667
*
8FR8|1|A|G|1686
8FR8|1|A|G|1687
8FR8|1|A|G|1688
*
8FR8|1|A|C|1747
8FR8|1|A|A|1748
8FR8|1|A|U|1749
8FR8|1|A|A|1750
8FR8|1|A|G|1751
*
8FR8|1|A|C|1762
8FR8|1|A|G|1763
8FR8|1|A|A|1764
8FR8|1|A|A|1765
8FR8|1|A|U|1766
8FR8|1|A|U|1767
8FR8|1|A|C|1768

Current chains

Chain A

23S rRNA (3119-MER)

Nearby chains