J4_8FZF_013

3D structure

PDB id

8FZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAG*CAUAACGU*ACCAAAG*UGC

Length

21 nucleotides

Bulged bases

8FZF|1|a|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZF|1|a|G|142
8FZF|1|a|A|143
8FZF|1|a|G|144
*
8FZF|1|a|C|178
8FZF|1|a|A|179
8FZF|1|a|U|180
8FZF|1|a|A|181
8FZF|1|a|A|182
8FZF|1|a|C|183
8FZF|1|a|G|184
8FZF|1|a|U|185
*
8FZF|1|a|A|192
8FZF|1|a|C|193
8FZF|1|a|C|194
8FZF|1|a|A|195
8FZF|1|a|A|196
8FZF|1|a|A|197
8FZF|1|a|G|198
*
8FZF|1|a|U|219
8FZF|1|a|G|220
8FZF|1|a|C|221

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20