J4_8FZJ_009
3D structure
- PDB id
- 8FZJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CU(2MG)*CGGC*GUCCUAAGGUAG*CGAAUG
- Length
- 25 nucleotides
- Bulged bases
- 8FZJ|1|A|U|1971
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FZJ|1|A|C|1833
8FZJ|1|A|U|1834
8FZJ|1|A|2MG|1835
*
8FZJ|1|A|C|1905
8FZJ|1|A|G|1906
8FZJ|1|A|G|1907
8FZJ|1|A|C|1908
*
8FZJ|1|A|G|1922
8FZJ|1|A|U|1923
8FZJ|1|A|C|1924
8FZJ|1|A|C|1925
8FZJ|1|A|U|1926
8FZJ|1|A|A|1927
8FZJ|1|A|A|1928
8FZJ|1|A|G|1929
8FZJ|1|A|G|1930
8FZJ|1|A|U|1931
8FZJ|1|A|A|1932
8FZJ|1|A|G|1933
*
8FZJ|1|A|C|1967
8FZJ|1|A|G|1968
8FZJ|1|A|A|1969
8FZJ|1|A|A|1970
8FZJ|1|A|U|1971
8FZJ|1|A|G|1972
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: