J4_8G5Z_005

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

8G5Z|1|L5|G|1269, 8G5Z|1|L5|A|1270, 8G5Z|1|L5|G|1271, 8G5Z|1|L5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|L5|C|981
8G5Z|1|L5|U|982
8G5Z|1|L5|C|983
*
8G5Z|1|L5|G|1070
8G5Z|1|L5|C|1071
8G5Z|1|L5|C|1072
*
8G5Z|1|L5|G|1240
8G5Z|1|L5|C|1241
8G5Z|1|L5|G|1242
8G5Z|1|L5|C|1243
*
8G5Z|1|L5|G|1268
8G5Z|1|L5|G|1269
8G5Z|1|L5|A|1270
8G5Z|1|L5|G|1271
8G5Z|1|L5|C|1272
8G5Z|1|L5|G|1273

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

eL6

Chain LF

60S ribosomal protein L7

Chain Lb

eL29