J4_8G5Z_010

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8G5Z|1|L5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|L5|G|2618
8G5Z|1|L5|G|2619
*
8G5Z|1|L5|U|2637
8G5Z|1|L5|G|2638
8G5Z|1|L5|U|2639
8G5Z|1|L5|G|2640
8G5Z|1|L5|A|2641
8G5Z|1|L5|A|2642
*
8G5Z|1|L5|U|2692
8G5Z|1|L5|G|2693
8G5Z|1|L5|G|2694
8G5Z|1|L5|A|2695
8G5Z|1|L5|A|2696
8G5Z|1|L5|A|2697
8G5Z|1|L5|G|2698
*
8G5Z|1|L5|U|2718
8G5Z|1|L5|C|2719

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

60S ribosomal protein L22

Chain Lg

60S ribosomal protein L34

Chain Lk

60S ribosomal protein L38