J4_8G60_014

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GUA(A2M)*(OMU)C*GUG*CGCC

Length

13 nucleotides

Bulged bases

8G60|1|L5|U|4677

QA status

Modified nucleotides: A2M, OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|G|4587
8G60|1|L5|U|4588
8G60|1|L5|A|4589
8G60|1|L5|A2M|4590
*
8G60|1|L5|OMU|4620
8G60|1|L5|C|4621
*
8G60|1|L5|G|4676
8G60|1|L5|U|4677
8G60|1|L5|G|4678
*
8G60|1|L5|C|4712
8G60|1|L5|G|4713
8G60|1|L5|C|4714
8G60|1|L5|C|4715

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

uL3

Chain LO

uL13

Chain LV

uL14