J4_8IE3_003

3D structure

PDB id

8IE3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

8IE3|1|2|G|1271, 8IE3|1|2|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IE3|1|2|C|981
8IE3|1|2|U|982
8IE3|1|2|C|983
*
8IE3|1|2|G|1070
8IE3|1|2|C|1071
8IE3|1|2|C|1072
*
8IE3|1|2|G|1240
8IE3|1|2|C|1241
8IE3|1|2|G|1242
8IE3|1|2|C|1243
*
8IE3|1|2|G|1268
8IE3|1|2|G|1269
8IE3|1|2|A|1270
8IE3|1|2|G|1271
8IE3|1|2|C|1272
8IE3|1|2|G|1273

Current chains

Chain 2

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L29

Chain o

60S ribosomal protein L6

Chain p

60S ribosomal protein L7