J4_8IE3_009

3D structure

PDB id

8IE3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUAAG*UUGAUC*GACC*GGG

Length

18 nucleotides

Bulged bases

8IE3|1|2|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IE3|1|2|C|4231
8IE3|1|2|U|4232
8IE3|1|2|A|4233
8IE3|1|2|A|4234
8IE3|1|2|G|4235
*
8IE3|1|2|U|4289
8IE3|1|2|U|4290
8IE3|1|2|G|4291
8IE3|1|2|A|4292
8IE3|1|2|U|4293
8IE3|1|2|C|4294
*
8IE3|1|2|G|4316
8IE3|1|2|A|4317
8IE3|1|2|C|4318
8IE3|1|2|C|4319
*
8IE3|1|2|G|4328
8IE3|1|2|G|4329
8IE3|1|2|G|4330

Current chains

Chain 2

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L29

Chain c

60S ribosomal protein L21