3D structure

PDB id
8INF (explore in PDB, NAKB, or RNA 3D Hub)
Description
human nuclear pre-60S ribosomal particle - State F'
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUCC*GGCC*GCGC*GGAGCG
Length
18 nucleotides
Bulged bases
8INF|1|2|G|1271, 8INF|1|2|C|1272
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8INF|1|2|C|981
8INF|1|2|U|982
8INF|1|2|C|983
8INF|1|2|C|984
*
8INF|1|2|G|1069
8INF|1|2|G|1070
8INF|1|2|C|1071
8INF|1|2|C|1072
*
8INF|1|2|G|1240
8INF|1|2|C|1241
8INF|1|2|G|1242
8INF|1|2|C|1243
*
8INF|1|2|G|1268
8INF|1|2|G|1269
8INF|1|2|A|1270
8INF|1|2|G|1271
8INF|1|2|C|1272
8INF|1|2|G|1273

Current chains

Chain 2
28S rRNA

Nearby chains

Chain C
60S ribosomal protein L29
Chain o
60S ribosomal protein L6
Chain p
60S ribosomal protein L7

Coloring options:

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