J4_8INF_006

3D structure

PDB id

8INF (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F'

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8INF|1|2|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INF|1|2|G|2618
8INF|1|2|G|2619
*
8INF|1|2|U|2637
8INF|1|2|G|2638
8INF|1|2|U|2639
8INF|1|2|G|2640
8INF|1|2|A|2641
8INF|1|2|A|2642
*
8INF|1|2|U|2692
8INF|1|2|G|2693
8INF|1|2|G|2694
8INF|1|2|A|2695
8INF|1|2|A|2696
8INF|1|2|A|2697
8INF|1|2|G|2698
*
8INF|1|2|U|2718
8INF|1|2|C|2719

Current chains

Chain 2

28S rRNA

Nearby chains

Chain F

60S ribosomal protein L34

Chain O

60S ribosomal protein L38

Chain a

60S ribosomal protein L19

Chain d

60S ribosomal protein L22