J4_8INF_007

3D structure

PDB id

8INF (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F'

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

8INF|1|2|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INF|1|2|C|4231
8INF|1|2|U|4232
8INF|1|2|A|4233
8INF|1|2|A|4234
8INF|1|2|G|4235
*
8INF|1|2|U|4289
8INF|1|2|U|4290
8INF|1|2|G|4291
*
8INF|1|2|C|4318
8INF|1|2|C|4319
*
8INF|1|2|G|4328
8INF|1|2|G|4329
8INF|1|2|G|4330

Current chains

Chain 2

28S rRNA

Nearby chains

Chain W

60S ribosomal protein L36a

Chain c

60S ribosomal protein L21

Chain f

Protein SDA1 homolog

Chain r

60S ribosomal protein L5