J4_8K2Z_002

3D structure

PDB id

8K2Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a human mascRNA A2G

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GG*CU*AC*GC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_8K2Z_002 not in the Motif Atlas

Homologous match to J4_8V1H_001

Geometric discrepancy: 0.1374

The information below is about J4_8V1H_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_76096.5

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

7

Unit IDs

8K2Z|1|B|G|7
8K2Z|1|B|G|8
*
8K2Z|1|B|C|18
8K2Z|1|B|U|19
*
8K2Z|1|B|A|33
8K2Z|1|B|C|34
*
8K2Z|1|B|G|50
8K2Z|1|B|C|51

Current chains

Chain B

RNA (57-MER)

Nearby chains