J4_8OIQ_002

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

8OIQ|1|B8|A|782, 8OIQ|1|B8|A|783

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|C|648
8OIQ|1|B8|A|649
8OIQ|1|B8|A|650
8OIQ|1|B8|G|651
*
8OIQ|1|B8|C|660
8OIQ|1|B8|U|661
*
8OIQ|1|B8|A|781
8OIQ|1|B8|A|782
8OIQ|1|B8|A|783
8OIQ|1|B8|G|784
*
8OIQ|1|B8|C|1003
8OIQ|1|B8|A|1004
8OIQ|1|B8|G|1005

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BA

uL22m

Chain BH

Mitochondrial ribosomal protein L32

Chain BV

bL17m

Chain Bi

39S ribosomal protein S30, mitochondrial