J4_8OIQ_004

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCCUG*CAUCAC*GCAAUG*CCACAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|G|824
8OIQ|1|B8|C|825
8OIQ|1|B8|C|826
8OIQ|1|B8|U|827
8OIQ|1|B8|G|828
*
8OIQ|1|B8|C|840
8OIQ|1|B8|A|841
8OIQ|1|B8|U|842
8OIQ|1|B8|C|843
8OIQ|1|B8|A|844
8OIQ|1|B8|C|845
*
8OIQ|1|B8|G|869
8OIQ|1|B8|C|870
8OIQ|1|B8|A|871
8OIQ|1|B8|A|872
8OIQ|1|B8|U|873
8OIQ|1|B8|G|874
*
8OIQ|1|B8|C|969
8OIQ|1|B8|C|970
8OIQ|1|B8|A|971
8OIQ|1|B8|C|972
8OIQ|1|B8|A|973
8OIQ|1|B8|C|974

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BL

Mitochondrial ribosomal protein L2