J4_8OIT_002

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

8OIT|1|B8|U|646, 8OIT|1|B8|A|782

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|C|644
8OIT|1|B8|A|645
8OIT|1|B8|U|646
8OIT|1|B8|G|647
*
8OIT|1|B8|C|656
8OIT|1|B8|U|657
*
8OIT|1|B8|A|780
8OIT|1|B8|A|781
8OIT|1|B8|A|782
8OIT|1|B8|G|783
*
8OIT|1|B8|C|1001
8OIT|1|B8|A|1002
8OIT|1|B8|G|1003

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BA

39S ribosomal protein L22, mitochondrial

Chain BH

39S ribosomal protein L32, mitochondrial

Chain BV

39S ribosomal protein L17, mitochondrial

Chain Bi

39S ribosomal protein S30, mitochondrial