J4_8OIT_004

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIT|1|B8|G|822
8OIT|1|B8|C|823
8OIT|1|B8|C|824
8OIT|1|B8|U|825
8OIT|1|B8|G|826
*
8OIT|1|B8|C|838
8OIT|1|B8|A|839
8OIT|1|B8|U|840
8OIT|1|B8|C|841
8OIT|1|B8|A|842
8OIT|1|B8|C|843
*
8OIT|1|B8|G|867
8OIT|1|B8|C|868
8OIT|1|B8|A|869
8OIT|1|B8|C|870
8OIT|1|B8|C|871
8OIT|1|B8|G|872
*
8OIT|1|B8|C|967
8OIT|1|B8|U|968
8OIT|1|B8|C|969
8OIT|1|B8|C|970
8OIT|1|B8|A|971
8OIT|1|B8|C|972

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BL

39S ribosomal protein L2, mitochondrial