J4_8P16_005
3D structure
- PDB id
- 8P16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UGG (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- GGUUC*GGUGAG*CU*AAUCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 8P16|1|1|G|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8P16_005 not in the Motif Atlas
- Homologous match to J4_5J7L_022
- Geometric discrepancy: 0.0526
- The information below is about J4_5J7L_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_69051.6
- Basepair signature
- cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
8P16|1|1|G|1310
8P16|1|1|G|1311
8P16|1|1|U|1312
8P16|1|1|U|1313
8P16|1|1|C|1314
*
8P16|1|1|G|1338
8P16|1|1|G|1339
8P16|1|1|U|1340
8P16|1|1|G|1341
8P16|1|1|A|1342
8P16|1|1|G|1343
*
8P16|1|1|C|1404
8P16|1|1|U|1405
*
8P16|1|1|A|1597
8P16|1|1|A|1598
8P16|1|1|U|1599
8P16|1|1|C|1600
8P16|1|1|G|1601
8P16|1|1|U|1602
8P16|1|1|A|1603
8P16|1|1|C|1604
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain T
- 50S ribosomal protein L23
- Chain d
- 50S ribosomal protein L34
Coloring options: