J4_8P2K_012

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8P2K|1|B5|A|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|G|2461
8P2K|1|B5|G|2462
*
8P2K|1|B5|U|2480
8P2K|1|B5|G|2481
8P2K|1|B5|U|2482
8P2K|1|B5|G|2483
8P2K|1|B5|A|2484
8P2K|1|B5|A|2485
*
8P2K|1|B5|U|2535
8P2K|1|B5|G|2536
8P2K|1|B5|G|2537
8P2K|1|B5|A|2538
8P2K|1|B5|A|2539
8P2K|1|B5|A|2540
8P2K|1|B5|G|2541
*
8P2K|1|B5|U|2561
8P2K|1|B5|C|2562

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19

Chain BU

60S ribosomal protein L22

Chain Bg

60S ribosomal protein L34

Chain Bk

60S ribosomal protein L38