J4_8PK0_001
3D structure
- PDB id
- 8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CAUG*CU*AAAG*CAG
- Length
- 13 nucleotides
- Bulged bases
- 8PK0|1|A|U|2316, 8PK0|1|A|A|2451, 8PK0|1|A|A|2452
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PK0|1|A|C|2314
8PK0|1|A|A|2315
8PK0|1|A|U|2316
8PK0|1|A|G|2317
*
8PK0|1|A|C|2326
8PK0|1|A|U|2327
*
8PK0|1|A|A|2450
8PK0|1|A|A|2451
8PK0|1|A|A|2452
8PK0|1|A|G|2453
*
8PK0|1|A|C|2702
8PK0|1|A|A|2703
8PK0|1|A|G|2704
Current chains
- Chain A
- 16S rRNA + pre-H68-71 segment
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: