J4_8PK0_003

3D structure

PDB id

8PK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PK0|1|A|G|2492
8PK0|1|A|C|2493
8PK0|1|A|C|2494
8PK0|1|A|U|2495
8PK0|1|A|G|2496
*
8PK0|1|A|C|2508
8PK0|1|A|A|2509
8PK0|1|A|U|2510
8PK0|1|A|C|2511
8PK0|1|A|A|2512
8PK0|1|A|C|2513
*
8PK0|1|A|G|2537
8PK0|1|A|C|2538
8PK0|1|A|A|2539
8PK0|1|A|C|2540
8PK0|1|A|C|2541
8PK0|1|A|G|2542
*
8PK0|1|A|C|2668
8PK0|1|A|U|2669
8PK0|1|A|C|2670
8PK0|1|A|C|2671
8PK0|1|A|A|2672
8PK0|1|A|C|2673

Current chains

Chain A

16S rRNA + pre-H68-71 segment

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial

Chain z

Mitochondrial ribosome-associated GTPase 1