J4_8QK7_005

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

8QK7|1|1|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_8QK7_005 not in the Motif Atlas

Homologous match to J4_5J7L_022

Geometric discrepancy: 0.0535

The information below is about J4_5J7L_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_69051.6

Basepair signature

cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

7

Unit IDs

8QK7|1|1|G|1310
8QK7|1|1|G|1311
8QK7|1|1|U|1312
8QK7|1|1|U|1313
8QK7|1|1|C|1314
*
8QK7|1|1|G|1338
8QK7|1|1|G|1339
8QK7|1|1|U|1340
8QK7|1|1|G|1341
8QK7|1|1|A|1342
8QK7|1|1|G|1343
*
8QK7|1|1|C|1404
8QK7|1|1|U|1405
*
8QK7|1|1|A|1597
8QK7|1|1|A|1598
8QK7|1|1|U|1599
8QK7|1|1|C|1600
8QK7|1|1|G|1601
8QK7|1|1|U|1602
8QK7|1|1|A|1603
8QK7|1|1|C|1604

Current chains

Chain 1

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23

Chain d

50S ribosomal protein L34