J4_8QPP_016

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAC*GAUGGUU*AUAAAAG*CAC

Length

20 nucleotides

Bulged bases

8QPP|1|A|G|181, 8QPP|1|A|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QPP|1|A|G|141
8QPP|1|A|A|142
8QPP|1|A|C|143
*
8QPP|1|A|G|177
8QPP|1|A|A|178
8QPP|1|A|U|179
8QPP|1|A|G|180
8QPP|1|A|G|181
8QPP|1|A|U|182
8QPP|1|A|U|183
*
8QPP|1|A|A|206
8QPP|1|A|U|207
8QPP|1|A|A|208
8QPP|1|A|A|209
8QPP|1|A|A|210
8QPP|1|A|A|211
8QPP|1|A|G|212
*
8QPP|1|A|C|227
8QPP|1|A|A|228
8QPP|1|A|C|229

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20