J4_8R08_002
3D structure
- PDB id
- 8R08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the cross-exon pre-B+AMPPNP complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.1 Å
Loop
- Sequence
- GGGG*CCCA*UGCG*CGAC
- Length
- 16 nucleotides
- Bulged bases
- 8R08|1|1|A|118
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8R08|1|1|G|15
8R08|1|1|G|16
8R08|1|1|G|17
8R08|1|1|G|18
*
8R08|1|1|C|46
8R08|1|1|C|47
8R08|1|1|C|48
8R08|1|1|A|49
*
8R08|1|1|U|90
8R08|1|1|G|91
8R08|1|1|C|92
8R08|1|1|G|93
*
8R08|1|1|C|116
8R08|1|1|G|117
8R08|1|1|A|118
8R08|1|1|C|119
Current chains
- Chain 1
- U1 snRNA
Nearby chains
- Chain 11
- Small nuclear ribonucleoprotein Sm D1
- Chain 13
- Small nuclear ribonucleoprotein Sm D3
- Chain 1K
- U1 small nuclear ribonucleoprotein 70 kDa
- Chain 1b
- Small nuclear ribonucleoprotein-associated proteins B and B'
- Chain G
- Probable ATP-dependent RNA helicase DDX23
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