J4_8RD8_006

3D structure

PDB id

8RD8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factors Balon and RaiA (structure 1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

AG*UGAAAG*UGAUAGC*GU

Length

17 nucleotides

Bulged bases

8RD8|1|Z2|U|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RD8|1|Z2|A|1428
8RD8|1|Z2|G|1429
*
8RD8|1|Z2|U|1450
8RD8|1|Z2|G|1451
8RD8|1|Z2|A|1452
8RD8|1|Z2|A|1453
8RD8|1|Z2|A|1454
8RD8|1|Z2|G|1455
*
8RD8|1|Z2|U|1506
8RD8|1|Z2|G|1507
8RD8|1|Z2|A|1508
8RD8|1|Z2|U|1509
8RD8|1|Z2|A|1510
8RD8|1|Z2|G|1511
8RD8|1|Z2|C|1512
*
8RD8|1|Z2|G|1534
8RD8|1|Z2|U|1535

Current chains

Chain Z2

23S rRNA

Nearby chains