J4_8RDW_013

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

UG*CAUACGAC*GAGAAAG*CG

Length

19 nucleotides

Bulged bases

8RDW|1|iN|A|242

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDW|1|iN|U|188
8RDW|1|iN|G|189
*
8RDW|1|iN|C|223
8RDW|1|iN|A|224
8RDW|1|iN|U|225
8RDW|1|iN|A|226
8RDW|1|iN|C|227
8RDW|1|iN|G|228
8RDW|1|iN|A|229
8RDW|1|iN|C|230
*
8RDW|1|iN|G|237
8RDW|1|iN|A|238
8RDW|1|iN|G|239
8RDW|1|iN|A|240
8RDW|1|iN|A|241
8RDW|1|iN|A|242
8RDW|1|iN|G|243
*
8RDW|1|iN|C|262
8RDW|1|iN|G|263

Current chains

Chain iN

16S rRNA

Nearby chains

Chain To

Small ribosomal subunit protein bS20