J4_8SCB_013

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUAA*(OMU)C*GUG*CGCC

Length

13 nucleotides

Bulged bases

8SCB|1|5|U|4677

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|G|4587
8SCB|1|5|U|4588
8SCB|1|5|A|4589
8SCB|1|5|A|4590
*
8SCB|1|5|OMU|4620
8SCB|1|5|C|4621
*
8SCB|1|5|G|4676
8SCB|1|5|U|4677
8SCB|1|5|G|4678
*
8SCB|1|5|C|4712
8SCB|1|5|G|4713
8SCB|1|5|C|4714
8SCB|1|5|C|4715

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain O

uL13

Chain V

Ribosomal protein L23