J4_8UAU_001

3D structure

PDB id

8UAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human ATE1 in complex with Arg-tRNA and a peptide substrate

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GUGG*CAUUG*CAAAGGUUG*CC

Length

20 nucleotides

Bulged bases

8UAU|1|R|U|27, 8UAU|1|R|A|43, 8UAU|1|R|A|44, 8UAU|1|R|U|47, 8UAU|1|R|U|48

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UAU|1|R|G|7
8UAU|1|R|U|8
8UAU|1|R|G|9
8UAU|1|R|G|10
*
8UAU|1|R|C|25
8UAU|1|R|A|26
8UAU|1|R|U|27
8UAU|1|R|U|28
8UAU|1|R|G|29
*
8UAU|1|R|C|41
8UAU|1|R|A|42
8UAU|1|R|A|43
8UAU|1|R|A|44
8UAU|1|R|G|45
8UAU|1|R|G|46
8UAU|1|R|U|47
8UAU|1|R|U|48
8UAU|1|R|G|49
*
8UAU|1|R|C|65
8UAU|1|R|C|66

Current chains

Chain R

RNA (76-MER)

Nearby chains

Chain A

Isoform ATE1-2 of Arginyl-tRNA--protein transferase 1