J4_8UIK_006
3D structure
- PDB id
- 8UIK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GG*UGUGAA*UGGAAAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 8UIK|1|L5|A|2696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UIK|1|L5|G|2618
8UIK|1|L5|G|2619
*
8UIK|1|L5|U|2637
8UIK|1|L5|G|2638
8UIK|1|L5|U|2639
8UIK|1|L5|G|2640
8UIK|1|L5|A|2641
8UIK|1|L5|A|2642
*
8UIK|1|L5|U|2692
8UIK|1|L5|G|2693
8UIK|1|L5|G|2694
8UIK|1|L5|A|2695
8UIK|1|L5|A|2696
8UIK|1|L5|A|2697
8UIK|1|L5|G|2698
*
8UIK|1|L5|U|2718
8UIK|1|L5|C|2719
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain LU
- Heparin-binding protein HBp15
- Chain Lg
- 60S ribosomal protein L34
- Chain Lk
- 60S ribosomal protein L38
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