J4_8UJ9_006

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8UJ9|1|L5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|G|2618
8UJ9|1|L5|G|2619
*
8UJ9|1|L5|U|2637
8UJ9|1|L5|G|2638
8UJ9|1|L5|U|2639
8UJ9|1|L5|G|2640
8UJ9|1|L5|A|2641
8UJ9|1|L5|A|2642
*
8UJ9|1|L5|U|2692
8UJ9|1|L5|G|2693
8UJ9|1|L5|G|2694
8UJ9|1|L5|A|2695
8UJ9|1|L5|A|2696
8UJ9|1|L5|A|2697
8UJ9|1|L5|G|2698
*
8UJ9|1|L5|U|2718
8UJ9|1|L5|C|2719

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

Heparin-binding protein HBp15

Chain Lg

60S ribosomal protein L34

Chain Lk

60S ribosomal protein L38