3D structure

PDB id
8URM (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CAAG*CGAAG*CGAG*CGUUAAG
Length
20 nucleotides
Bulged bases
8URM|1|1|A|654
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8URM|1|1|C|601
8URM|1|1|A|602
8URM|1|1|A|603
8URM|1|1|G|604
*
8URM|1|1|C|624
8URM|1|1|G|625
8URM|1|1|A|626
8URM|1|1|A|627
8URM|1|1|G|628
*
8URM|1|1|C|635
8URM|1|1|G|636
8URM|1|1|A|637
8URM|1|1|G|638
*
8URM|1|1|C|650
8URM|1|1|G|651
8URM|1|1|U|652
8URM|1|1|U|653
8URM|1|1|A|654
8URM|1|1|A|655
8URM|1|1|G|656

Current chains

Chain 1
13S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain e
50S ribosomal protein L35

Coloring options:

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