J4_8UTJ_004

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAUAAA*UC*GCUU*AG

Length

15 nucleotides

Bulged bases

8UTJ|1|1|G|1271, 8UTJ|1|1|A|1272, 8UTJ|1|1|U|1273, 8UTJ|1|1|A|1275, 8UTJ|1|1|U|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UTJ|1|1|C|1270
8UTJ|1|1|G|1271
8UTJ|1|1|A|1272
8UTJ|1|1|U|1273
8UTJ|1|1|A|1274
8UTJ|1|1|A|1275
8UTJ|1|1|A|1276
*
8UTJ|1|1|U|1294
8UTJ|1|1|C|1295
*
8UTJ|1|1|G|1645
8UTJ|1|1|C|1646
8UTJ|1|1|U|1647
8UTJ|1|1|U|1648
*
8UTJ|1|1|A|2009
8UTJ|1|1|G|2010

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22

Chain b

50S ribosomal protein L32