J4_8UU5_011

3D structure

PDB id

8UU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAGUAACAC*GGU*AUAG*CC

Length

18 nucleotides

Bulged bases

8UU5|1|a|C|119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU5|1|a|G|113
8UU5|1|a|A|114
8UU5|1|a|G|115
8UU5|1|a|U|116
8UU5|1|a|A|117
8UU5|1|a|A|118
8UU5|1|a|C|119
8UU5|1|a|A|120
8UU5|1|a|C|121
*
8UU5|1|a|G|246
8UU5|1|a|G|247
8UU5|1|a|U|248
*
8UU5|1|a|A|294
8UU5|1|a|U|295
8UU5|1|a|A|296
8UU5|1|a|G|297
*
8UU5|1|a|C|319
8UU5|1|a|C|320

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain l

Small ribosomal subunit protein uS12

Chain p

Small ribosomal subunit protein bS16

Chain q

Small ribosomal subunit protein uS17