3D structure

PDB id
8UX8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GGAAG*CGCG*CAG*CGUAC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UX8|1|1|G|297
8UX8|1|1|G|298
8UX8|1|1|A|299
8UX8|1|1|A|300
8UX8|1|1|G|301
*
8UX8|1|1|C|316
8UX8|1|1|G|317
8UX8|1|1|C|318
8UX8|1|1|G|319
*
8UX8|1|1|C|323
8UX8|1|1|A|324
8UX8|1|1|G|325
*
8UX8|1|1|C|337
8UX8|1|1|G|338
8UX8|1|1|U|339
8UX8|1|1|A|340
8UX8|1|1|C|341

Current chains

Chain 1
23S rRNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain U
50S ribosomal protein L24

Coloring options:

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