3D structure

PDB id
8UX8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CAAG*CGAAG*CGAG*CGUUAAG
Length
20 nucleotides
Bulged bases
8UX8|1|1|A|654
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UX8|1|1|C|601
8UX8|1|1|A|602
8UX8|1|1|A|603
8UX8|1|1|G|604
*
8UX8|1|1|C|624
8UX8|1|1|G|625
8UX8|1|1|A|626
8UX8|1|1|A|627
8UX8|1|1|G|628
*
8UX8|1|1|C|635
8UX8|1|1|G|636
8UX8|1|1|A|637
8UX8|1|1|G|638
*
8UX8|1|1|C|650
8UX8|1|1|G|651
8UX8|1|1|U|652
8UX8|1|1|U|653
8UX8|1|1|A|654
8UX8|1|1|A|655
8UX8|1|1|G|656

Current chains

Chain 1
23S rRNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain e
50S ribosomal protein L35

Coloring options:

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