3D structure

PDB id
8UX8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GGUUC*GGUGAG*CU*AAUCGUAC
Length
21 nucleotides
Bulged bases
8UX8|1|1|G|1341
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UX8|1|1|G|1310
8UX8|1|1|G|1311
8UX8|1|1|U|1312
8UX8|1|1|U|1313
8UX8|1|1|C|1314
*
8UX8|1|1|G|1338
8UX8|1|1|G|1339
8UX8|1|1|U|1340
8UX8|1|1|G|1341
8UX8|1|1|A|1342
8UX8|1|1|G|1343
*
8UX8|1|1|C|1404
8UX8|1|1|U|1405
*
8UX8|1|1|A|1597
8UX8|1|1|A|1598
8UX8|1|1|U|1599
8UX8|1|1|C|1600
8UX8|1|1|G|1601
8UX8|1|1|U|1602
8UX8|1|1|A|1603
8UX8|1|1|C|1604

Current chains

Chain 1
23S rRNA

Nearby chains

Chain T
50S ribosomal protein L23
Chain d
50S ribosomal protein L34

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2534 s