J4_8UX8_011

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGC*GAC*GAAG*UGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UX8|1|1|G|2643
8UX8|1|1|G|2644
8UX8|1|1|G|2645
8UX8|1|1|C|2646
*
8UX8|1|1|G|2674
8UX8|1|1|A|2675
8UX8|1|1|C|2676
*
8UX8|1|1|G|2732
8UX8|1|1|A|2733
8UX8|1|1|A|2734
8UX8|1|1|G|2735
*
8UX8|1|1|U|2769
8UX8|1|1|G|2770
8UX8|1|1|C|2771

Current chains

Chain 1

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13

Chain K

50S ribosomal protein L14