J4_8UX8_012

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

8UX8|1|2|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UX8|1|2|G|115
8UX8|1|2|A|116
8UX8|1|2|G|117
8UX8|1|2|U|118
8UX8|1|2|A|119
8UX8|1|2|A|120
8UX8|1|2|U|121
8UX8|1|2|G|122
*
8UX8|1|2|U|239
8UX8|1|2|G|240
*
8UX8|1|2|C|286
8UX8|1|2|U|287
8UX8|1|2|A|288
8UX8|1|2|G|289
*
8UX8|1|2|C|311
8UX8|1|2|C|312

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16

Chain v

Small ribosomal subunit protein uS17