J4_8UXA_001
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAUAA*UAUAA*UAUAGUAAGUAC*GGAAAG
- Length
- 29 nucleotides
- Bulged bases
- 8UXA|1|A|U|69, 8UXA|1|A|U|383, 8UXA|1|A|A|384
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UXA|1|A|U|66
8UXA|1|A|A|67
8UXA|1|A|A|68
8UXA|1|A|U|69
8UXA|1|A|A|70
8UXA|1|A|A|71
*
8UXA|1|A|U|91
8UXA|1|A|A|92
8UXA|1|A|U|93
8UXA|1|A|A|94
8UXA|1|A|A|95
*
8UXA|1|A|U|381
8UXA|1|A|A|382
8UXA|1|A|U|383
8UXA|1|A|A|384
8UXA|1|A|G|385
8UXA|1|A|U|386
8UXA|1|A|A|387
8UXA|1|A|A|388
8UXA|1|A|G|389
8UXA|1|A|U|390
8UXA|1|A|A|391
8UXA|1|A|C|392
*
8UXA|1|A|G|399
8UXA|1|A|G|400
8UXA|1|A|A|401
8UXA|1|A|A|402
8UXA|1|A|A|403
8UXA|1|A|G|404
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein mL41
- Chain 8
- Large ribosomal subunit protein mL50
- Chain D
- Large ribosomal subunit protein uL4m
- Chain P
- Large ribosomal subunit protein uL23m
- Chain Q
- Large ribosomal subunit protein uL24m
- Chain Y
- Large ribosomal subunit protein bL34m
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