J4_8UXA_004
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUU*AAAA*UAUA*UGUAUACCGUAAU
- Length
- 25 nucleotides
- Bulged bases
- 8UXA|1|A|U|1342, 8UXA|1|A|A|1352, 8UXA|1|A|U|1412, 8UXA|1|A|A|1548
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UXA|1|A|G|1340
8UXA|1|A|G|1341
8UXA|1|A|U|1342
8UXA|1|A|U|1343
*
8UXA|1|A|A|1351
8UXA|1|A|A|1352
8UXA|1|A|A|1353
8UXA|1|A|A|1354
*
8UXA|1|A|U|1410
8UXA|1|A|A|1411
8UXA|1|A|U|1412
8UXA|1|A|A|1413
*
8UXA|1|A|U|1545
8UXA|1|A|G|1546
8UXA|1|A|U|1547
8UXA|1|A|A|1548
8UXA|1|A|U|1549
8UXA|1|A|A|1550
8UXA|1|A|C|1551
8UXA|1|A|C|1552
8UXA|1|A|G|1553
8UXA|1|A|U|1554
8UXA|1|A|A|1555
8UXA|1|A|A|1556
8UXA|1|A|U|1557
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein mL41
- Chain P
- Large ribosomal subunit protein uL23m
- Chain W
- Large ribosomal subunit protein bL32m
- Chain Y
- Large ribosomal subunit protein bL34m
- Chain d
- Large ribosomal subunit protein mL67
Coloring options: